Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865027.1_cds_XP_016516191.1_28460
CDS Infomation

[gene=LOC107832816] [db_xref=GeneID:107832816] [protein=putative ubiquitin-conjugating enzyme E2 38] [protein_id=XP_016516191.1] [location=complement(join(36765..37004,38323..38634,38757..38896,39485..39548,39652..40233,40917..40976))] [gbkey=CDS]
Sequence

ATGGACGTTGAAATCGAACAACTTGCTTCTCAAGATTCTGACAAACTTAAACACAATAAG
GAGGCTATGACTAAGGATAATTCCCAAACGGTAGCTGGGTCCGCATCCGTATCTCTTGAC
TCTGGCAATAACAACAGTTCCAATTCAGACTTCTCATTTCATGAAGATCAGAATGATGGA
GATGATGGCATGGATGATGACGATGATGTGTCAAACTATGATGACGACGATGATGATAAT
GGCTATATGTTTTATGACAATGATGACGATGATGAGTGTGATTACTTGAGTATGCAGGCA
CAATTTGATAATGTTGATTTGCCCGCTGGTGTAGAGGCCACAGTTTCTTGGTTGAATGAA
CCTGCTCCCAGTTCAAAAGCGCCTTCCCAAGTTAGCTCTTCTAGTCATCTAGTAGGCGCT
GGGACAGTGAAACCCACACTTCCGGAGCATGGAAGTAGTAGTAACTTTGCTCAGGTCCCT
GCTTCAAGCAGTTCTCTAGTGTCTGTAGAGTCAAGTTCTCGTGGAAAGGAAGAGGCAGCT
GAAGAAGAAGCCATGAAAAAGTATCAAAGTTTTAAGCATTTTGATGTGGTAGATGACTTC
TCAGATCATCATTACAGTAGCTTGGGCTTCCAGGGGCAACAGCCACCTAAGGCCTGGAGT
AAGAAAGTTCAGGATGAGTGGAAGATATTGGAAAATGATTTACCCGATACAATATATGTA
AGGGTCTATGAATCTAGGATGGATCTCCTTAGGGCTGTCATTATTGGACCACAAGGCACT
CCATACCATGATGGTCACTTTGTCTTTGATGTCCTGTTCCCACAAAACTATCCTGATGTG
CCACCGATGGTTTACTACTATTCTGGTGGTTTGAGACTGAATCCGAACTTGTATGATTGT
GGAAAAGTCTGTCTCAGTCTTCTGAACACTTGGACTGGTAAAGGTAATGAAAGGTGGCTG
CCCAAGACATCGACCATGCTGCAAGTCCTGGTTTCTATACAAGCTCTAATTTTGAATTCA
AGGCCTTTCTTTAATGAGCCTGGATATGAAGCCTCATATCCTGGACCTGACGGAGAGAGG
AGATCTAAAGCTTACAATGAAGATGTTTTTGTTCTATCTTTGAAAACAATGACATATACA
TTGCGAAGGCCCCCAAAGCATTTTGAAGACCTTGTCATTGGTCACTTCCGTTGCTACGCT
GTAGACATTCTCTCAGCATGCAAGGCATATGTGGAAGGAGCTCCAGTTGGTTCTGTGATC
AAGGGAAAAGTCCAGGGTAATGCAACTGAAGACAGGAGCTCGCCGATATTCAGGGAATCA
GTATCCAGAATGATGAATGGTCTTATATCCCTTTTCACTAAGAATGGTGCGAAGGATTGT
GACCGGTTTCGTGTCTAA

Peptide Sequence

PEP ID

XP_016516191.1
PEP Infomation

PREDICTED: putative ubiquitin-conjugating enzyme E2 38 [Nicotiana tabacum]
Sequence

MDVEIEQLASQDSDKLKHNKEAMTKDNSQTVAGSASVSLDSGNNNSSNSDFSFHEDQNDG
DDGMDDDDDVSNYDDDDDDNGYMFYDNDDDDECDYLSMQAQFDNVDLPAGVEATVSWLNE
PAPSSKAPSQVSSSSHLVGAGTVKPTLPEHGSSSNFAQVPASSSSLVSVESSSRGKEEAA
EEEAMKKYQSFKHFDVVDDFSDHHYSSLGFQGQQPPKAWSKKVQDEWKILENDLPDTIYV
RVYESRMDLLRAVIIGPQGTPYHDGHFVFDVLFPQNYPDVPPMVYYYSGGLRLNPNLYDC
GKVCLSLLNTWTGKGNERWLPKTSTMLQVLVSIQALILNSRPFFNEPGYEASYPGPDGER
RSKAYNEDVFVLSLKTMTYTLRRPPKHFEDLVIGHFRCYAVDILSACKAYVEGAPVGSVI
KGKVQGNATEDRSSPIFRESVSRMMNGLISLFTKNGAKDCDRFRV

Transcript Sequence

Gene sequence data has not been registered.